TY - JOUR
T1 - Quantitative Interpretation of Protein Diffusion Coefficients in Mixed Protiated-Deuteriated Aqueous Solvents
AU - Tang, Bridget
AU - Chong, Katie
AU - Massefski, Walter
AU - Evans, Robert
N1 - © 2022 The Authors. CC BY 4.0
PY - 2022/8/11
Y1 - 2022/8/11
N2 - Diffusion-ordered nuclear magnetic resonance (NMR) spectroscopy is widely used for the analysis of mixtures, dispersing the signals of different species in a two-dimensional spectrum according to their diffusion coefficients. However, interpretation of these diffusion coefficients is typically purely qualitative, for example, to deduce which species are bigger or smaller. In studies of proteins in solution, important questions concern the molecular weight of the proteins, the presence or absence of aggregation, and the degree of folding. The Stokes–Einstein Gierer–Wirtz estimation (SEGWE) method has been previously developed to simplify the complex relationship between diffusion coefficient and molecular mass, allowing the prediction of a species’ diffusion coefficient in a pure solvent based on its molecular weight. Here, we show that SEGWE can be extended to successfully predict both peptide and protein diffusion coefficients in mixed protiated–deuteriated water samples and, hence, distinguish effectively between globular and disordered proteins.
AB - Diffusion-ordered nuclear magnetic resonance (NMR) spectroscopy is widely used for the analysis of mixtures, dispersing the signals of different species in a two-dimensional spectrum according to their diffusion coefficients. However, interpretation of these diffusion coefficients is typically purely qualitative, for example, to deduce which species are bigger or smaller. In studies of proteins in solution, important questions concern the molecular weight of the proteins, the presence or absence of aggregation, and the degree of folding. The Stokes–Einstein Gierer–Wirtz estimation (SEGWE) method has been previously developed to simplify the complex relationship between diffusion coefficient and molecular mass, allowing the prediction of a species’ diffusion coefficient in a pure solvent based on its molecular weight. Here, we show that SEGWE can be extended to successfully predict both peptide and protein diffusion coefficients in mixed protiated–deuteriated water samples and, hence, distinguish effectively between globular and disordered proteins.
KW - Diffusion
KW - Magnetic Resonance Spectroscopy/methods
KW - Proteins
KW - Solvents/chemistry
KW - Water/chemistry
UR - https://pubs.acs.org/doi/10.1021/acs.jpcb.2c03554
UR - http://www.scopus.com/inward/record.url?scp=85135992287&partnerID=8YFLogxK
UR - https://data.mendeley.com/datasets/fn64x6vpn4/1
U2 - 10.1021/acs.jpcb.2c03554
DO - 10.1021/acs.jpcb.2c03554
M3 - Article
C2 - 35917500
SN - 1520-6106
VL - 126
SP - 5887
EP - 5895
JO - Journal of Physical Chemistry: Part B
JF - Journal of Physical Chemistry: Part B
IS - 31
ER -